PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han003381
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family ERF
Protein Properties Length: 201aa    MW: 22616.4 Da    PI: 7.7541
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Han#S32087147PU_refUnigeneView CDS
PUT-169a-Helianthus_annuus-17544PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.6e-1985135255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                +++GVr+++ +g+++AeIrdp ++g  +r++lg++ t+e+Aa a+++a+ k++g
  Han003381  85 KFRGVRRRP-WGKYAAEIRDPAKRG--ARVWLGTYETPEDAAVAYDQAAFKIRG 135
                89*******.**********97765..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.7E-3184144IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-2385144IPR016177DNA-binding domain
PROSITE profilePS5103224.30285143IPR001471AP2/ERF domain
SMARTSM003801.4E-3685149IPR001471AP2/ERF domain
CDDcd000181.08E-3085145No hitNo description
PfamPF008471.3E-1285135IPR001471AP2/ERF domain
PRINTSPR003678.2E-138697IPR001471AP2/ERF domain
PRINTSPR003678.2E-13125145IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
MFQDQSFMSE ADLSFLDSIQ HHLLFDTQIP DLFPVIDSGY SGNVATVGDM SVSSGFVQPV  60
VKLERPEVVE NQEFQGTQVA QEFRKFRGVR RRPWGKYAAE IRDPAKRGAR VWLGTYETPE  120
DAAVAYDQAA FKIRGSRALL NFPHLIGTNM VEPVRVAPRR KTVMRDVSPR SSSSSEDGGV  180
KRARISSGGD TMVDDFYYRP Y
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A7e-3084143463ATERF1
2gcc_A7e-3084143463ATERF1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Han.80040.0embryo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009593489.16e-57PREDICTED: ethylene-responsive transcription factor 13-like
RefseqXP_016511096.16e-57PREDICTED: ethylene-responsive transcription factor 13-like
SwissprotQ8L9K11e-41ERF99_ARATH; Ethylene-responsive transcription factor 13
TrEMBLA0A124SBP25e-65A0A124SBP2_CYNCS; AP2/ERF domain-containing protein
STRINGPGSC0003DMT4000914744e-54(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.12e-42ethylene-responsive element binding factor 13